Many thanks to those who have responded,. please forgive me, I'm new to the forum so not sure how to respond directly to individual posts...
Dago, I did check the alternator wire clip screws, the threads in the casings all seem too short. There are three screws holding the stator in place, however it is unlikely that these could 'escape' without causing damage to the inside of the alternator 'drum' on the end of the crank and mine is spotless. Interestingly all of the 'screws' on the alternator stator and cable guides are fitted with hex head bolts so not original cross head screws.
Reinhoud, this is sounding a bit like a complete engine strip if it is the case.... I did see some similar screws in the guides but they seem shorter in length. Do you have a diagram you could point me to online. If I can see the part I can check if the part number is the same. If it is I may be able to see it by removing the cam cover and using the bore scope down the chain casing to look for the missing screw. I have a photo but cant attach it (can only attach a web address). Will attach a pic when I work out how..
Gixer1460, I definitely think this may be the case. The thrust washer behind the intermediate starter gear took a few attempts to locate, and when it did drop out during assembly it ended up on top of the casing rib - I think that this is what must have happened some time ago - the hex head bolts on the laternator may be evidence of previous 'lost bolts'
Any askamaskinservice, many thanks for the welcome. My GS thou is an 'ongoing' project that was started before, house wife and kids - needless to say its taken some time but it is nearing completion. Always good to know there are forums like this where you can seek good advice and helpful tips :-)